Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase | EEJ33_11690 | Not Available | - | 2489997 - 2490479 | 17291.0 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | EEJ33_11695 | Not Available | - | 2490613 - 2492274 | 60907.4 |
| 3-deoxy-8-phosphooctulonate synthase | EEJ33_11700 | Not Available | - | 2492757 - 2493608 | 30797.3 |
| hypothetical protein | EEJ33_11705 | Not Available | - | 2493628 - 2494440 | 31000.2 |
| hypothetical protein | EEJ33_11710 | Not Available | - | 2494456 - 2494839 | 14182.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | EEJ33_11715 | Not Available | - | 2494839 - 2495699 | 31283.4 |
| peptide chain release factor 1 | EEJ33_11720 | Not Available | - | 2495703 - 2496791 | 40191.3 |
| glutamyl-trna reductase | EEJ33_11725 | Not Available | - | 2496821 - 2498080 | 45760.1 |
| lipoprotein localization protein lolb | EEJ33_11730 | Not Available | + | 2498239 - 2498856 | 23562.2 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EEJ33_11735 | Not Available | + | 2498838 - 2499725 | 31959.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


