Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | EEJ33_11640 | Not Available | + | 2480162 - 2480629 | 17161.7 |
| methyl-accepting chemotaxis protein | EEJ33_11645 | Not Available | - | 2480732 - 2482603 | 67726.7 |
| ai-2e family transporter | EEJ33_11650 | Not Available | - | 2482795 - 2483859 | 39152.4 |
| hypothetical protein | EEJ33_11655 | Not Available | - | 2483852 - 2484088 | 8788.72 |
| m48 family peptidase | EEJ33_11660 | Not Available | + | 2484272 - 2485726 | 54252.9 |
| arsenate reductase (glutaredoxin) | EEJ33_11665 | Not Available | + | 2485749 - 2486099 | 13234.1 |
| nad(p)h:quinone oxidoreductase | EEJ33_11670 | Not Available | + | 2486096 - 2486656 | 20125.1 |
| duf2069 domain-containing protein | EEJ33_11675 | Not Available | + | 2486659 - 2487096 | 16537.6 |
| duf2066 domain-containing protein | EEJ33_11680 | Not Available | - | 2487262 - 2488410 | 41996.6 |
| uracil-xanthine permease | EEJ33_11685 | Not Available | + | 2488631 - 2489884 | 43537.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


