Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2919 domain-containing protein | EEJ33_11590 | Not Available | - | 2473182 - 2473646 | 17633.8 |
| duf2956 domain-containing protein | EEJ33_11595 | Not Available | + | 2473790 - 2474146 | 13523.1 |
| hypothetical protein | EEJ33_11600 | Not Available | - | 2474213 - 2474500 | 10921.2 |
| arsc family reductase | EEJ33_11605 | Not Available | + | 2474829 - 2475224 | 15065.2 |
| succinyl-diaminopimelate desuccinylase | EEJ33_11610 | Not Available | + | 2475255 - 2476388 | 40721.5 |
| d-alanyl-d-alanine carboxypeptidase family protein | EEJ33_11615 | Not Available | + | 2476316 - 2477065 | 28100.4 |
| duf2897 family protein | EEJ33_11620 | Not Available | + | 2477055 - 2477279 | 8412.09 |
| outer membrane protein assembly factor bamc | EEJ33_11625 | Not Available | - | 2477372 - 2478391 | 38335.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EEJ33_11630 | Not Available | - | 2478449 - 2479327 | 31375.9 |
| glycine cleavage system protein r | EEJ33_11635 | Not Available | + | 2479605 - 2480147 | 20074.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


