Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flim | EEJ33_11485 | Not Available | - | 2450987 - 2452033 | 39619.8 |
| flagellar basal body-associated protein flil | EEJ33_11490 | Not Available | - | 2452041 - 2452544 | 17849.6 |
| flagellar hook-length control protein flik | EEJ33_11495 | Not Available | - | 2452579 - 2454555 | 68156.4 |
| flagella biosynthesis chaperone flij | EEJ33_11505 | Not Available | - | 2454721 - 2455212 | 19665.5 |
| flagellar protein export atpase flii | EEJ33_11510 | Not Available | - | 2455176 - 2456495 | 46768.2 |
| flagellar assembly protein flih | EEJ33_11515 | Not Available | - | 2456499 - 2457311 | 30012.1 |
| flagellar motor switch protein flig | EEJ33_11520 | Not Available | - | 2457392 - 2458438 | 38158.9 |
| flagellar basal body m-ring protein flif | EEJ33_11525 | Not Available | - | 2458431 - 2460173 | 63850.9 |
| flagellar hook-basal body complex protein flie | EEJ33_11530 | Not Available | - | 2460189 - 2460500 | 11382.7 |
| sigma-54-dependent fis family transcriptional regulator | EEJ33_11535 | Not Available | - | 2460576 - 2462015 | 52469.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


