Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | EEJ33_11435 | Not Available | + | 2443302 - 2443925 | 22502.4 |
| chorismate synthase | EEJ33_11440 | Not Available | - | 2444007 - 2445092 | 39092.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EEJ33_11445 | Not Available | - | 2445322 - 2446254 | 35153.9 |
| endonuclease smrb | EEJ33_11450 | Not Available | + | 2446320 - 2446880 | 21497.6 |
| flagellar biosynthesis protein flhb | EEJ33_11455 | Not Available | - | 2447023 - 2448153 | 42101.2 |
| flagellar type iii secretion system protein flir | EEJ33_11460 | Not Available | - | 2448163 - 2448945 | 28663.2 |
| flagellar biosynthetic protein fliq | EEJ33_11465 | Not Available | - | 2448954 - 2449223 | 10330.3 |
| flagellar biosynthetic protein flip | EEJ33_11470 | Not Available | - | 2449236 - 2450135 | 32423.6 |
| flagellar biosynthetic protein flio | EEJ33_11475 | Not Available | - | 2450113 - 2450502 | 14221.9 |
| flagellar motor switch protein flin | EEJ33_11480 | Not Available | - | 2450506 - 2450916 | 15016.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


