Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EEJ33_11385 | Not Available | + | 2433230 - 2434108 | 33699.7 |
| duf4442 domain-containing protein | EEJ33_11390 | Not Available | - | 2434112 - 2434612 | 19425.4 |
| transcriptional repressor | EEJ33_11395 | Not Available | + | 2434978 - 2435430 | 16927.1 |
| aspartate-semialdehyde dehydrogenase | EEJ33_11400 | Not Available | - | 2435512 - 2436525 | 37345.3 |
| 4-phosphoerythronate dehydrogenase | EEJ33_11405 | Not Available | - | 2436509 - 2437672 | 42523.5 |
| beta-ketoacyl-acp synthase i | EEJ33_11410 | Not Available | - | 2437858 - 2439069 | 42572.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EEJ33_11415 | Not Available | + | 2439187 - 2441214 | 74956.4 |
| nad(p)h-dependent oxidoreductase | EEJ33_11420 | Not Available | - | 2441289 - 2441816 | 18384.6 |
| yfcl family protein | EEJ33_11425 | Not Available | - | 2442031 - 2442294 | 9591.27 |
| elongation factor p hydroxylase | EEJ33_11430 | Not Available | - | 2442333 - 2442863 | 20414.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


