Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | EEJ33_11335 | Not Available | + | 2424858 - 2426147 | 48377.2 |
| nif3-like dinuclear metal center hexameric protein | EEJ33_11340 | Not Available | - | 2426199 - 2426969 | 28418.9 |
| duf1853 family protein | EEJ33_11345 | Not Available | + | 2427047 - 2427796 | 29243.5 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | EEJ33_11350 | Not Available | - | 2427846 - 2429492 | 59347.4 |
| replication initiation negative regulator seqa | EEJ33_11355 | Not Available | - | 2429601 - 2430146 | 19957.1 |
| alpha/beta fold hydrolase | EEJ33_11360 | Not Available | + | 2430239 - 2431012 | 28754.9 |
| duf2788 domain-containing protein | EEJ33_11365 | Not Available | + | 2431108 - 2431329 | 8056.21 |
| flavodoxin flda | EEJ33_11370 | Not Available | + | 2431378 - 2431905 | 19769.1 |
| lrgb family protein | EEJ33_11375 | Not Available | - | 2431979 - 2432668 | 24983.6 |
| cida/lrga family protein | EEJ33_11380 | Not Available | - | 2432674 - 2433114 | 16695.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


