Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter atp-binding protein znuc | EEJ33_11285 | Not Available | + | 2413240 - 2414028 | 29118.4 |
| zinc abc transporter permease subunit znub | EEJ33_11290 | Not Available | + | 2414021 - 2414803 | 27667.3 |
| succinate--coa ligase subunit alpha | EEJ33_11295 | Not Available | - | 2414892 - 2415764 | 29942.4 |
| succinyl-coa ligase subunit beta | EEJ33_11300 | Not Available | - | 2415764 - 2416930 | 41401.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EEJ33_11305 | Not Available | - | 2417098 - 2418312 | 44010.2 |
| 2-oxoglutarate dehydrogenase e1 component | EEJ33_11310 | Not Available | - | 2418341 - 2421151 | 105361.0 |
| succinate dehydrogenase iron-sulfur subunit | EEJ33_11315 | Not Available | - | 2421240 - 2421950 | 26393.0 |
| succinate dehydrogenase flavoprotein subunit | EEJ33_11320 | Not Available | - | 2421965 - 2423731 | 64531.9 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EEJ33_11325 | Not Available | - | 2423732 - 2424076 | 12823.0 |
| succinate dehydrogenase cytochrome b556 subunit | EEJ33_11330 | Not Available | - | 2424070 - 2424462 | 14031.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


