Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase sixa | EEJ33_11235 | Not Available | - | 2398453 - 2398926 | 17745.3 |
| insulinase family protein | EEJ33_11240 | Not Available | + | 2399070 - 2401889 | 107415.0 |
| voc family protein | EEJ33_11245 | Not Available | - | 2401886 - 2402482 | 22334.8 |
| arginine--trna ligase | EEJ33_11250 | Not Available | + | 2402616 - 2404415 | 66437.0 |
| hit domain-containing protein | EEJ33_11255 | Not Available | + | 2404518 - 2404961 | 16765.4 |
| iron transporter feoc | EEJ33_11260 | Not Available | - | 2405220 - 2405450 | 8511.42 |
| fe(2+) transporter permease subunit feob | EEJ33_11265 | Not Available | - | 2405447 - 2407723 | 83210.5 |
| ferrous iron transport protein a | EEJ33_11270 | Not Available | - | 2407720 - 2407950 | 8311.43 |
| helix-turn-helix domain-containing protein | EEJ33_11275 | Not Available | - | 2408725 - 2412090 | 127176.0 |
| zinc abc transporter substrate-binding protein znua | EEJ33_11280 | Not Available | - | 2412272 - 2413165 | 32887.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


