Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmh | EEJ33_11135 | Not Available | - | 2379181 - 2379657 | 17946.5 |
| dsbe family thiol:disulfide interchange protein | EEJ33_11140 | Not Available | - | 2379654 - 2380208 | 20710.0 |
| heme lyase ccmf/nrfe family subunit | EEJ33_11145 | Not Available | - | 2380209 - 2382164 | 73111.3 |
| cytochrome c maturation protein ccme | EEJ33_11150 | Not Available | - | 2382161 - 2382643 | 17710.6 |
| heme exporter protein ccmd | EEJ33_11155 | Not Available | - | 2382640 - 2382846 | 7844.63 |
| heme abc transporter permease | EEJ33_11160 | Not Available | - | 2382846 - 2383598 | 27993.6 |
| heme exporter protein ccmb | EEJ33_11165 | Not Available | - | 2383689 - 2384357 | 23733.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | EEJ33_11170 | Not Available | - | 2384354 - 2384977 | 23198.2 |
| duf2802 domain-containing protein | EEJ33_11175 | Not Available | - | 2385350 - 2385853 | 18980.2 |
| chemotaxis protein chew | EEJ33_11180 | Not Available | - | 2385829 - 2386323 | 18521.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


