Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_11085 | Not Available | + | 2370277 - 2370840 | 21284.3 |
| Trna-ser | Not Available | Not Available | + | 2371183 - 2371273 | Not Available |
| histone deacetylase | EEJ33_11095 | Not Available | - | 2371336 - 2372256 | 33802.5 |
| dna topoisomerase iii | EEJ33_11100 | Not Available | - | 2372277 - 2374220 | 72575.5 |
| grx4 family monothiol glutaredoxin | EEJ33_11105 | Not Available | - | 2374305 - 2374637 | 12223.8 |
| superoxide dismutase | EEJ33_11110 | Not Available | + | 2374889 - 2375473 | 21470.0 |
| hypothetical protein | EEJ33_11115 | Not Available | + | 2375555 - 2376091 | 20120.8 |
| sdr family oxidoreductase | EEJ33_11120 | Not Available | + | 2376454 - 2377134 | 25120.1 |
| vacj family lipoprotein | EEJ33_11125 | Not Available | - | 2377147 - 2377893 | 27729.6 |
| c-type cytochrome biogenesis protein ccmi | EEJ33_11130 | Not Available | - | 2377964 - 2379178 | 45270.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


