Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l32 | EEJ33_10725 | Not Available | - | 2309204 - 2309374 | 6296.5 |
| 23s rrna accumulation protein yced | EEJ33_10730 | Not Available | - | 2309409 - 2309933 | 19778.2 |
| septum formation inhibitor maf | EEJ33_10735 | Not Available | + | 2310081 - 2310662 | 21403.9 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | EEJ33_10740 | Not Available | - | 2310770 - 2311717 | 35980.6 |
| hypothetical protein | EEJ33_10745 | Not Available | + | 2311631 - 2311870 | 8606.5 |
| hypothetical protein | EEJ33_10750 | Not Available | - | 2311835 - 2312143 | 11514.6 |
| ribonuclease e | EEJ33_10755 | Not Available | + | 2312329 - 2315421 | 114815.0 |
| dmt family transporter | EEJ33_10760 | Not Available | + | 2315723 - 2316598 | 31997.1 |
| is3 family transposase | EEJ33_10765 | Not Available | + | 2316687 - 2317867 | 45730.0 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | EEJ33_10770 | Not Available | - | 2317974 - 2320658 | 96193.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


