Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipo-like protein | EEJ33_10625 | Not Available | - | 2291296 - 2291727 | 15777.2 |
| acyl-coa thioesterase ii | EEJ33_10630 | Not Available | + | 2291878 - 2292738 | 32246.6 |
| lrp/asnc family transcriptional regulator | EEJ33_10635 | Not Available | - | 2292747 - 2293205 | 17669.6 |
| plp-dependent cysteine synthase family protein | EEJ33_10640 | Not Available | + | 2293327 - 2294394 | 39893.4 |
| protease sohb | EEJ33_10645 | Not Available | - | 2294533 - 2295594 | 38620.8 |
| ycik family oxidoreductase | EEJ33_10650 | Not Available | + | 2295753 - 2296496 | 26736.3 |
| ycgn family cysteine cluster protein | EEJ33_10655 | Not Available | - | 2296590 - 2297027 | 16717.5 |
| ykgj family cysteine cluster protein | EEJ33_10660 | Not Available | + | 2297166 - 2297435 | 9582.74 |
| pts glucose transporter subunit iibc | EEJ33_10665 | Not Available | - | 2297525 - 2299027 | 52515.2 |
| ychf/tatd family dna exonuclease | EEJ33_10670 | Not Available | - | 2299399 - 2300166 | 28580.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


