Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_10550 | Not Available | - | 2280106 - 2280315 | 7690.2 |
| duf1240 domain-containing protein | EEJ33_10555 | Not Available | - | 2280385 - 2280825 | 16113.2 |
| is3 family transposase | EEJ33_10565 | Not Available | + | 2281597 - 2282777 | 45683.9 |
| duf1176 domain-containing protein | EEJ33_10575 | Not Available | - | 2283573 - 2284604 | 37108.6 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | EEJ33_10580 | Not Available | - | 2284686 - 2285552 | 31684.7 |
| lysr family transcriptional regulator | EEJ33_10585 | Not Available | + | 2285648 - 2286568 | 34369.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 2287749 - 2287845 | Not Available |
| ggdef domain-containing protein | EEJ33_10610 | Not Available | - | 2287976 - 2290057 | 79321.6 |
| hypothetical protein | EEJ33_10615 | Not Available | - | 2290146 - 2290889 | 26578.4 |
| mgmt family protein | EEJ33_10620 | Not Available | + | 2290940 - 2291242 | 11220.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


