Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybhb/ybcl family raf kinase inhibitor-like protein | EEJ33_10490 | Not Available | - | 2267871 - 2268413 | 19425.1 |
| cpbp family intramembrane metalloprotease | EEJ33_10495 | Not Available | + | 2268697 - 2269527 | 30229.9 |
| chitinase | EEJ33_10500 | Not Available | - | 2269617 - 2272883 | 118406.0 |
| mfs transporter | EEJ33_10505 | Not Available | - | 2273447 - 2274682 | 44546.4 |
| phosphatase | EEJ33_10510 | Not Available | - | 2274721 - 2275218 | 17764.2 |
| glyceraldehyde-3-phosphate dehydrogenase | EEJ33_10515 | Not Available | - | 2275232 - 2276233 | 36486.9 |
| arsr family transcriptional regulator | EEJ33_10520 | Not Available | - | 2276330 - 2276671 | 13160.2 |
| gnat family n-acetyltransferase | EEJ33_10530 | Not Available | - | 2277261 - 2277803 | 20628.2 |
| is3 family transposase | EEJ33_10540 | Not Available | + | 2278137 - 2279212 | 41781.4 |
| hypothetical protein | EEJ33_10545 | Not Available | - | 2279247 - 2280119 | 32572.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


