Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | EEJ33_10390 | Not Available | - | 2247193 - 2248140 | 36649.3 |
| abc transporter atp-binding protein | EEJ33_10395 | Not Available | - | 2248290 - 2249300 | 37086.7 |
| abc transporter atp-binding protein | EEJ33_10400 | Not Available | - | 2249279 - 2250253 | 36141.3 |
| oligopeptide abc transporter permease oppc | EEJ33_10405 | Not Available | - | 2250278 - 2251180 | 33397.6 |
| oligopeptide abc transporter permease oppb | EEJ33_10410 | Not Available | - | 2251194 - 2252114 | 33548.1 |
| oligopeptide abc transporter substrate-binding protein oppa | EEJ33_10415 | Not Available | - | 2252263 - 2253894 | 61049.1 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EEJ33_10420 | Not Available | + | 2254517 - 2255329 | 30336.1 |
| hamp domain-containing protein | EEJ33_10425 | Not Available | + | 2255333 - 2256937 | 60504.6 |
| two-component system response regulator | EEJ33_10430 | Not Available | - | 2256955 - 2258298 | 50708.4 |
| eal domain-containing protein | EEJ33_10435 | Not Available | - | 2258308 - 2259909 | 61503.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


