Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yeca family protein | EEJ33_10340 | Not Available | - | 2235615 - 2236244 | 23152.8 |
| trna dihydrouridine(16) synthase dusc | EEJ33_10345 | Not Available | + | 2236401 - 2237372 | 36384.9 |
| sensor domain-containing diguanylate cyclase | EEJ33_10350 | Not Available | - | 2237389 - 2238858 | 55589.7 |
| abc transporter atp-binding protein | EEJ33_10355 | Not Available | - | 2239027 - 2239821 | 28742.2 |
| abc transporter permease | EEJ33_10360 | Not Available | - | 2239818 - 2240801 | 33943.4 |
| abc transporter substrate-binding protein | EEJ33_10365 | Not Available | - | 2240877 - 2241842 | 33342.4 |
| dna-binding protein vf530 | EEJ33_10370 | Not Available | + | 2242283 - 2242693 | 16047.2 |
| duf412 domain-containing protein | EEJ33_10375 | Not Available | - | 2242816 - 2243268 | 17303.5 |
| acetate kinase | EEJ33_10380 | Not Available | + | 2243619 - 2244815 | 42845.5 |
| phosphate acetyltransferase | EEJ33_10385 | Not Available | + | 2244951 - 2247095 | 76896.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


