Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EEJ33_10190 | Not Available | - | 2205405 - 2206142 | 26375.5 |
| imidazole glycerol phosphate synthase subunit hish | EEJ33_10195 | Not Available | - | 2206185 - 2206796 | 22408.2 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | EEJ33_10200 | Not Available | - | 2206796 - 2207869 | 39857.9 |
| histidinol-phosphate transaminase | EEJ33_10205 | Not Available | - | 2207922 - 2208962 | 38351.3 |
| histidinol dehydrogenase | EEJ33_10210 | Not Available | - | 2208966 - 2210261 | 46173.4 |
| atp phosphoribosyltransferase | EEJ33_10215 | Not Available | - | 2210266 - 2211162 | 32974.6 |
| na+/h+ antiporter nhac family protein | EEJ33_10220 | Not Available | - | 2211571 - 2213172 | 56423.8 |
| transcriptional regulator | EEJ33_10225 | Not Available | + | 2213860 - 2214279 | 15346.3 |
| inosine/guanosine kinase | EEJ33_10230 | Not Available | - | 2214329 - 2215633 | 48511.4 |
| trna 2-thiouridine(34) synthase mnma | EEJ33_10235 | Not Available | + | 2215895 - 2217013 | 41893.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


