Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | EEJ33_10140 | Not Available | - | 2193439 - 2194707 | 45372.4 |
| grxa family glutaredoxin | EEJ33_10145 | Not Available | + | 2194995 - 2195258 | 9881.76 |
| transporter | EEJ33_10150 | Not Available | + | 2195460 - 2197136 | 60523.1 |
| atp-dependent clp protease atp-binding subunit clpa | EEJ33_10155 | Not Available | - | 2197205 - 2199475 | 84056.8 |
| atp-dependent clp protease adaptor clps | EEJ33_10160 | Not Available | - | 2199514 - 2199834 | 12314.8 |
| cold shock domain-containing protein cspd | EEJ33_10165 | Not Available | + | 2200298 - 2200528 | 8328.79 |
| nadp-dependent isocitrate dehydrogenase | EEJ33_10170 | Not Available | - | 2200627 - 2202852 | 80519.2 |
| 23s rrna pseudouridine(2457) synthase rlue | EEJ33_10175 | Not Available | + | 2203162 - 2203887 | 26996.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EEJ33_10180 | Not Available | - | 2204021 - 2204653 | 23420.0 |
| imidazole glycerol phosphate synthase cyclase subunit | EEJ33_10185 | Not Available | - | 2204650 - 2205423 | 28353.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


