Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | EEJ33_10090 | Not Available | - | 2182150 - 2183415 | 46066.2 |
| atpase | EEJ33_10095 | Not Available | + | 2183638 - 2185593 | 74175.0 |
| response regulator | EEJ33_10100 | Not Available | + | 2185542 - 2186087 | 20709.8 |
| hypothetical protein | EEJ33_10105 | Not Available | + | 2186278 - 2186826 | 20143.6 |
| tfox family dna transformation protein | EEJ33_10110 | Not Available | - | 2186922 - 2187530 | 23576.3 |
| hdod domain-containing protein | EEJ33_10115 | Not Available | + | 2187872 - 2188807 | 35058.6 |
| lysine exporter lyso family protein | EEJ33_10120 | Not Available | + | 2188828 - 2189733 | 32479.5 |
| hypothetical protein | EEJ33_10125 | Not Available | + | 2189922 - 2190431 | 19297.8 |
| putative pyridoxal-dependent aspartate 1-decarboxylase | EEJ33_10130 | Not Available | + | 2190541 - 2192187 | 61582.4 |
| murr/rpir family transcriptional regulator | EEJ33_10135 | Not Available | + | 2192494 - 2193348 | 31526.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation



