Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | EEJ33_10040 | Not Available | + | 2170588 - 2171844 | 43620.6 |
| thymidine kinase | EEJ33_10045 | Not Available | - | 2171944 - 2172522 | 21681.0 |
| aspartate--trna ligase | EEJ33_10050 | Not Available | - | 2172619 - 2174394 | 65828.4 |
| duf72 domain-containing protein | EEJ33_10055 | Not Available | + | 2174686 - 2175555 | 33007.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | EEJ33_10060 | Not Available | + | 2175693 - 2176421 | 27357.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | EEJ33_10065 | Not Available | + | 2176520 - 2177491 | 37385.1 |
| atp-dependent zn protease | EEJ33_10070 | Not Available | + | 2177611 - 2178348 | 27705.1 |
| gonadoliberin iii | EEJ33_10075 | Not Available | + | 2178356 - 2179864 | 55299.8 |
| alpha-l-glutamate ligase-like protein | EEJ33_10080 | Not Available | + | 2179864 - 2180853 | 35894.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EEJ33_10085 | Not Available | - | 2180934 - 2182073 | 41995.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


