Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(2605) synthase rlub | EEJ33_09990 | Not Available | - | 2160689 - 2161657 | 36734.1 |
| threonylcarbamoyl-amp synthase | EEJ33_09995 | Not Available | - | 2161790 - 2162410 | 23143.8 |
| php domain-containing protein | EEJ33_10000 | Not Available | - | 2162413 - 2163285 | 32713.6 |
| trp operon leader peptide | EEJ33_10005 | Not Available | + | 2163350 - 2163487 | 5411.29 |
| anthranilate synthase component 1 | EEJ33_10010 | Not Available | + | 2163620 - 2165191 | 58038.2 |
| aminodeoxychorismate/anthranilate synthase component ii | EEJ33_10015 | Not Available | + | 2165188 - 2165799 | 21682.3 |
| anthranilate phosphoribosyltransferase | EEJ33_10020 | Not Available | + | 2165820 - 2166818 | 35434.7 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | EEJ33_10025 | Not Available | + | 2166824 - 2168233 | 52024.1 |
| tryptophan synthase subunit beta | EEJ33_10030 | Not Available | + | 2168274 - 2169464 | 42828.4 |
| tryptophan synthase subunit alpha | EEJ33_10035 | Not Available | + | 2169464 - 2170270 | 28531.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


