Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter | EEJ33_09940 | Not Available | - | 2148161 - 2148535 | 13935.6 |
| nad-dependent malic enzyme | EEJ33_09945 | Not Available | + | 2148980 - 2150668 | 62191.4 |
| duf3392 domain-containing protein | EEJ33_09950 | Not Available | + | 2150672 - 2151040 | 13617.3 |
| vancomycin high temperature exclusion protein | EEJ33_09955 | Not Available | + | 2151013 - 2151777 | 28766.5 |
| ggdef domain-containing protein | EEJ33_09960 | Not Available | - | 2151878 - 2153209 | 50216.3 |
| cysteine desulfurase-like protein | EEJ33_09965 | Not Available | - | 2153467 - 2154729 | 46417.4 |
| agglutination protein | EEJ33_09970 | Not Available | - | 2154704 - 2155363 | 24838.7 |
| thioredoxin-disulfide reductase | EEJ33_09975 | Not Available | + | 2155974 - 2156930 | 34347.6 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | EEJ33_09980 | Not Available | + | 2157050 - 2158837 | 65844.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | EEJ33_09985 | Not Available | + | 2158830 - 2160551 | 63418.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


