Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase domain-containing protein | EEJ33_09840 | Not Available | - | 2126726 - 2127493 | 29640.7 |
| elongation factor p-like protein yeip | EEJ33_09845 | Not Available | + | 2127712 - 2128278 | 20898.9 |
| duf440 family protein | EEJ33_09850 | Not Available | + | 2128283 - 2128603 | 12202.2 |
| duf3187 family protein | EEJ33_09855 | Not Available | + | 2128742 - 2129689 | 35982.0 |
| histidine utilization repressor | EEJ33_09860 | Not Available | + | 2129806 - 2130516 | 26753.2 |
| imidazolonepropionase | EEJ33_09865 | Not Available | + | 2130620 - 2131828 | 43764.6 |
| formimidoylglutamase | EEJ33_09870 | Not Available | + | 2131818 - 2132840 | 37851.7 |
| urocanate hydratase | EEJ33_09875 | Not Available | + | 2132859 - 2134556 | 61784.0 |
| histidine ammonia-lyase | EEJ33_09880 | Not Available | + | 2134568 - 2136103 | 54908.4 |
| duf3581 family protein | EEJ33_09885 | Not Available | + | 2136252 - 2136977 | 27536.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


