Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EEJ33_09790 | Not Available | - | 2116716 - 2117834 | 42590.6 |
| Trna-gly | Not Available | Not Available | + | 2118080 - 2118155 | Not Available |
| Trna-leu | Not Available | Not Available | + | 2118166 - 2118252 | Not Available |
| Trna-gly | Not Available | Not Available | + | 2118317 - 2118392 | Not Available |
| Trna-cys | Not Available | Not Available | + | 2118395 - 2118468 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | EEJ33_09815 | Not Available | - | 2118727 - 2119284 | 21406.6 |
| excinuclease abc subunit uvrc | EEJ33_09820 | Not Available | - | 2119332 - 2121164 | 69107.0 |
| two-component system response regulator uvry | EEJ33_09825 | Not Available | - | 2121164 - 2121808 | 23693.9 |
| dna polymerase ii | EEJ33_09830 | Not Available | + | 2122183 - 2124546 | 89654.5 |
| eal domain-containing protein | EEJ33_09835 | Not Available | - | 2124518 - 2126632 | 79143.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


