Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrgb family protein | EEJ33_09730 | Not Available | + | 2105597 - 2106271 | 23960.2 |
| cytidine deaminase | EEJ33_09735 | Not Available | + | 2106441 - 2107328 | 31957.2 |
| aec family transporter | EEJ33_09740 | Not Available | + | 2107487 - 2108362 | 31661.6 |
| phosphoribosylglycinamide formyltransferase 2 | EEJ33_09745 | Not Available | + | 2108510 - 2109691 | 42536.8 |
| thiopurine s-methyltransferase | EEJ33_09755 | Not Available | - | 2109785 - 2110441 | 25121.9 |
| phosphoribosylglycinamide formyltransferase | EEJ33_09760 | Not Available | + | 2110910 - 2111689 | 29128.7 |
| integration host factor subunit alpha | EEJ33_09770 | Not Available | - | 2111811 - 2112107 | 11119.4 |
| phenylalanine--trna ligase subunit beta | EEJ33_09775 | Not Available | - | 2112546 - 2114933 | 86179.7 |
| phenylalanine--trna ligase subunit alpha | EEJ33_09780 | Not Available | - | 2114960 - 2115943 | 37036.1 |
| gnat family n-acetyltransferase | EEJ33_09785 | Not Available | + | 2116234 - 2116719 | 17537.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


