Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter atp-binding protein btud | EEJ33_09675 | Not Available | - | 2095306 - 2096061 | 27572.3 |
| vitamin b12 abc transporter permease btuc | EEJ33_09680 | Not Available | - | 2096048 - 2097055 | 36063.8 |
| succinylglutamate desuccinylase | EEJ33_09685 | Not Available | - | 2097124 - 2098152 | 39048.8 |
| alpha-ribazole phosphatase | EEJ33_09690 | Not Available | - | 2098468 - 2099070 | 22401.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EEJ33_09695 | Not Available | - | 2099077 - 2099616 | 19572.6 |
| adenosylcobinamide-gdp ribazoletransferase | EEJ33_09700 | Not Available | - | 2099625 - 2100410 | 28581.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EEJ33_09705 | Not Available | - | 2100410 - 2101519 | 39427.0 |
| l-cystine transporter | EEJ33_09715 | Not Available | + | 2102259 - 2103632 | 47480.7 |
| exodeoxyribonuclease i | EEJ33_09720 | Not Available | + | 2103776 - 2105200 | 54507.8 |
| cida/lrga family protein | EEJ33_09725 | Not Available | + | 2105217 - 2105606 | 13856.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


