Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EEJ33_09620 | Not Available | + | 2083176 - 2083913 | 27221.8 |
| ribonucleoside-diphosphate reductase subunit alpha | EEJ33_09625 | Not Available | + | 2084362 - 2086647 | 85818.2 |
| ribonucleotide-diphosphate reductase subunit beta | EEJ33_09630 | Not Available | + | 2086744 - 2087877 | 43584.6 |
| (2fe-2s)-binding protein | EEJ33_09635 | Not Available | + | 2087877 - 2088155 | 10170.3 |
| cina family nicotinamide mononucleotide deamidase-related protein | EEJ33_09645 | Not Available | - | 2088800 - 2090047 | 45834.0 |
| duf3943 domain-containing protein | EEJ33_09650 | Not Available | + | 2090211 - 2091110 | 33441.0 |
| glycine cleavage system protein r | EEJ33_09655 | Not Available | + | 2091371 - 2091883 | 18310.9 |
| methyl-accepting chemotaxis protein | EEJ33_09660 | Not Available | + | 2092114 - 2093724 | 57670.8 |
| duf2750 domain-containing protein | EEJ33_09665 | Not Available | + | 2093772 - 2094167 | 15243.9 |
| sam-dependent methyltransferase | EEJ33_09670 | Not Available | + | 2094346 - 2094921 | 21678.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


