Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | EEJ33_09515 | Not Available | - | 2060030 - 2060680 | 24366.0 |
| histidine kinase | EEJ33_09520 | Not Available | - | 2060661 - 2062016 | 50854.7 |
| trap transporter large permease subunit | EEJ33_09530 | Not Available | - | 2062123 - 2063406 | 45770.3 |
| trap transporter small permease subunit | EEJ33_09535 | Not Available | - | 2063416 - 2063949 | 20079.0 |
| abc transporter substrate-binding protein | EEJ33_09540 | Not Available | - | 2064051 - 2065169 | 42033.4 |
| hypothetical protein | EEJ33_09545 | Not Available | - | 2065531 - 2065944 | 14740.0 |
| duf2982 domain-containing protein | EEJ33_09550 | Not Available | + | 2066048 - 2066764 | 27117.9 |
| mbl fold metallo-hydrolase | EEJ33_09555 | Not Available | - | 2066758 - 2067414 | 23611.1 |
| duf882 domain-containing protein | EEJ33_09560 | Not Available | - | 2067478 - 2068026 | 20401.7 |
| murein l,d-transpeptidase | EEJ33_09565 | Not Available | - | 2068172 - 2069746 | 59981.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


