Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | EEJ33_09415 | Not Available | + | 2033367 - 2034737 | 50681.6 |
| 6-carboxytetrahydropterin synthase qued | EEJ33_09420 | Not Available | - | 2034796 - 2035167 | 14214.2 |
| methyl-accepting chemotaxis protein | EEJ33_09425 | Not Available | + | 2035474 - 2037105 | 59807.2 |
| asparagine--trna ligase | EEJ33_09430 | Not Available | + | 2037251 - 2038651 | 52472.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EEJ33_09435 | Not Available | - | 2038717 - 2039565 | 29851.1 |
| aspartate/tyrosine/aromatic aminotransferase | EEJ33_09440 | Not Available | + | 2040088 - 2041278 | 42949.4 |
| cyclic nucleotide-binding/cbs domain-containing protein | EEJ33_09445 | Not Available | + | 2041571 - 2043484 | 72525.7 |
| 3'-5' exonuclease | EEJ33_09450 | Not Available | + | 2043481 - 2044191 | 27352.9 |
| methyl-accepting chemotaxis protein | EEJ33_09455 | Not Available | - | 2044316 - 2046211 | 68218.6 |
| glucan biosynthesis protein g | EEJ33_09460 | Not Available | + | 2046604 - 2048241 | 61014.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


