Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr01620 family protein | EEJ33_09365 | Not Available | - | 2020208 - 2021227 | 36973.8 |
| ycjx family protein | EEJ33_09370 | Not Available | - | 2021224 - 2022597 | 51835.3 |
| hypothetical protein | EEJ33_09375 | Not Available | - | 2022824 - 2023009 | 6828.73 |
| fumarate hydratase | EEJ33_09380 | Not Available | - | 2023163 - 2024680 | 54751.1 |
| aminodeoxychorismate synthase component 1 | EEJ33_09385 | Not Available | + | 2024856 - 2026232 | 51360.0 |
| coa pyrophosphatase | EEJ33_09390 | Not Available | + | 2026429 - 2027043 | 23672.7 |
| septum formation protein | EEJ33_09395 | Not Available | + | 2027342 - 2028595 | 45047.0 |
| l-serine ammonia-lyase | EEJ33_09400 | Not Available | + | 2028688 - 2030049 | 49241.3 |
| efflux rnd transporter periplasmic adaptor subunit | EEJ33_09405 | Not Available | + | 2030215 - 2031402 | 42450.9 |
| macb family efflux pump subunit | EEJ33_09410 | Not Available | + | 2031402 - 2033360 | 70763.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


