Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf535 domain-containing protein | EEJ33_09315 | Not Available | + | 2008828 - 2009748 | 35915.5 |
| response regulator | EEJ33_09320 | Not Available | - | 2009776 - 2010252 | 17895.1 |
| ghkl domain-containing protein | EEJ33_09325 | Not Available | - | 2010221 - 2011570 | 50081.9 |
| slc13 family permease | EEJ33_09330 | Not Available | - | 2011580 - 2013043 | 52659.3 |
| methyl-accepting chemotaxis protein | EEJ33_09335 | Not Available | + | 2013377 - 2015008 | 59269.6 |
| alanine racemase | EEJ33_09340 | Not Available | + | 2015120 - 2016343 | 44052.9 |
| dmt family transporter | EEJ33_09345 | Not Available | + | 2016464 - 2017342 | 31044.2 |
| duf2947 family protein | EEJ33_09350 | Not Available | - | 2017410 - 2017883 | 18765.1 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | EEJ33_09355 | Not Available | - | 2017978 - 2018553 | 22455.0 |
| transcriptional regulator tyrr | EEJ33_09360 | Not Available | - | 2018553 - 2020094 | 57713.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


