Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1460 domain-containing protein | EEJ33_09260 | Not Available | - | 1996329 - 1997126 | 29591.5 |
| galactose/methyl galactoside abc transporter permease mglc | EEJ33_09265 | Not Available | - | 1997300 - 1998313 | 35813.6 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | EEJ33_09270 | Not Available | - | 1998318 - 1999826 | 56317.5 |
| galactose/glucose abc transporter substrate-binding protein mglb | EEJ33_09275 | Not Available | - | 2000031 - 2001005 | 34852.5 |
| dinitrogenase iron-molybdenum cofactor | EEJ33_09285 | Not Available | + | 2001501 - 2001983 | 17578.1 |
| (na+)-nqr maturation nqrm | EEJ33_09290 | Not Available | + | 2001962 - 2002177 | 7998.89 |
| penicillin-binding protein | EEJ33_09295 | Not Available | - | 2002260 - 2005331 | 116287.0 |
| response regulator | EEJ33_09300 | Not Available | + | 2005706 - 2006410 | 26562.1 |
| hamp domain-containing protein | EEJ33_09305 | Not Available | + | 2006436 - 2007758 | 50280.1 |
| mipa/ompv family protein | EEJ33_09310 | Not Available | + | 2007972 - 2008745 | 27997.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


