Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EEJ33_09210 | Not Available | - | 1982890 - 1983366 | 18037.4 |
| propionyl-coa synthetase | EEJ33_09215 | Not Available | - | 1983540 - 1985438 | 70085.1 |
| 2-methylaconitate cis-trans isomerase prpf | EEJ33_09220 | Not Available | - | 1985422 - 1986624 | 42319.5 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | EEJ33_09225 | Not Available | - | 1986633 - 1989239 | 95144.7 |
| 2-methylcitrate synthase | EEJ33_09230 | Not Available | - | 1989358 - 1990491 | 41673.9 |
| methylisocitrate lyase | EEJ33_09235 | Not Available | - | 1990677 - 1991603 | 33738.7 |
| gntr family transcriptional regulator | EEJ33_09240 | Not Available | - | 1991584 - 1992291 | 26941.5 |
| tripartite tricarboxylate transporter substrate binding protein | EEJ33_09245 | Not Available | + | 1992921 - 1993892 | 34836.6 |
| tripartite tricarboxylate transporter tctb family protein | EEJ33_09250 | Not Available | + | 1994141 - 1994638 | 18326.0 |
| tripartite tricarboxylate transporter permease | EEJ33_09255 | Not Available | + | 1994648 - 1996177 | 53694.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


