Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | EEJ33_09155 | Not Available | - | 1966509 - 1969439 | 109564.0 |
| peroxiredoxin | EEJ33_09165 | Not Available | + | 1970090 - 1970563 | 16859.3 |
| response regulator | EEJ33_09170 | Not Available | - | 1970685 - 1974665 | 148775.0 |
| two-component system response regulator | EEJ33_09175 | Not Available | + | 1974787 - 1975926 | 42356.2 |
| maleylacetoacetate isomerase | EEJ33_09180 | Not Available | - | 1975908 - 1976555 | 24654.6 |
| faa hydrolase family protein | EEJ33_09185 | Not Available | - | 1976552 - 1977571 | 36874.9 |
| homogentisate 1,2-dioxygenase | EEJ33_09190 | Not Available | - | 1977578 - 1978714 | 43314.9 |
| 4-hydroxyphenylpyruvate dioxygenase | EEJ33_09195 | Not Available | - | 1978707 - 1979780 | 40363.1 |
| m20/m25/m40 family metallo-hydrolase | EEJ33_09200 | Not Available | + | 1980240 - 1981346 | 39311.1 |
| nudix domain-containing protein | EEJ33_09205 | Not Available | - | 1981412 - 1982809 | 51717.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


