Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | EEJ33_09105 | Not Available | + | 1956803 - 1957624 | 29762.6 |
| siroheme synthase | EEJ33_09110 | Not Available | - | 1957694 - 1958632 | 35116.2 |
| amino acid abc transporter substrate-binding protein | EEJ33_09115 | Not Available | + | 1959088 - 1960116 | 36873.0 |
| amino acid abc transporter permease | EEJ33_09120 | Not Available | + | 1960243 - 1961448 | 44209.9 |
| amino acid abc transporter permease | EEJ33_09125 | Not Available | + | 1961451 - 1962548 | 40756.8 |
| amino acid abc transporter atp-binding protein | EEJ33_09130 | Not Available | + | 1962571 - 1963326 | 28696.0 |
| bax inhibitor-1/ycca family protein | EEJ33_09135 | Not Available | + | 1963570 - 1964241 | 23950.1 |
| tuse/dsrc/dsvc family sulfur relay protein | EEJ33_09140 | Not Available | + | 1964355 - 1964684 | 12402.1 |
| acylphosphatase | EEJ33_09145 | Not Available | - | 1964750 - 1965034 | 10723.8 |
| methyltransferase domain-containing protein | EEJ33_09150 | Not Available | + | 1965273 - 1966466 | 44613.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


