Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp70 family protein | EEJ33_09055 | Not Available | + | 1942885 - 1944807 | 69061.5 |
| molecular chaperone dnak | EEJ33_09060 | Not Available | + | 1945024 - 1947870 | 105816.0 |
| diguanylate cyclase | EEJ33_09065 | Not Available | - | 1948016 - 1949194 | 44607.1 |
| hypothetical protein | EEJ33_09070 | Not Available | + | 1949567 - 1950247 | 26527.6 |
| sensor domain-containing diguanylate cyclase | EEJ33_09075 | Not Available | - | 1950298 - 1951629 | 50459.0 |
| abc transporter substrate-binding protein | EEJ33_09080 | Not Available | - | 1951626 - 1952642 | 38213.0 |
| hypothetical protein | EEJ33_09085 | Not Available | - | 1952799 - 1953047 | 10000.5 |
| ggdef domain-containing protein | EEJ33_09090 | Not Available | + | 1953275 - 1955221 | 74586.6 |
| 7-cyano-7-deazaguanine synthase quec | EEJ33_09095 | Not Available | - | 1955193 - 1955888 | 25169.5 |
| 7-carboxy-7-deazaguanine synthase quee | EEJ33_09100 | Not Available | - | 1955901 - 1956638 | 27333.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


