Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_08945 | Not Available | + | 1920325 - 1920585 | 9582.56 |
| response regulator | EEJ33_08950 | Not Available | + | 1920578 - 1920958 | 13692.9 |
| methyl-accepting chemotaxis protein | EEJ33_08955 | Not Available | + | 1920966 - 1922201 | 47365.4 |
| qace family quaternary ammonium compound efflux smr transporter | EEJ33_08960 | Not Available | - | 1922259 - 1922573 | 10743.7 |
| deoxyribodipyrimidine photo-lyase | EEJ33_08965 | Not Available | - | 1922719 - 1924233 | 58445.1 |
| mfs transporter | EEJ33_08970 | Not Available | - | 1924404 - 1925810 | 49976.4 |
| lysr family transcriptional regulator | EEJ33_08975 | Not Available | + | 1925897 - 1926847 | 35890.7 |
| duf2256 domain-containing protein | EEJ33_08980 | Not Available | - | 1926844 - 1927005 | 6358.67 |
| lipoate--protein ligase | EEJ33_08985 | Not Available | - | 1927238 - 1928254 | 38782.1 |
| molecular chaperone | EEJ33_08990 | Not Available | - | 1928379 - 1929731 | 49067.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


