Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipase | EEJ33_08835 | Not Available | + | 1892213 - 1894138 | 72212.4 |
| hypothetical protein | EEJ33_08840 | Not Available | + | 1894135 - 1894878 | 28570.4 |
| duf2931 family protein | EEJ33_08845 | Not Available | + | 1895023 - 1895757 | 27958.9 |
| is3 family transposase | EEJ33_08855 | Not Available | - | 1896207 - 1897282 | 41765.4 |
| hcp family type vi secretion system effector | EEJ33_08865 | Not Available | - | 1899170 - 1899688 | 19046.3 |
| carboxypeptidase m32 | EEJ33_08870 | Not Available | + | 1899886 - 1901460 | 59100.3 |
| multidrug efflux mfs transporter permease subunit vceb | EEJ33_08875 | Not Available | - | 1901538 - 1903073 | 55910.3 |
| multidrug efflux mfs transporter adaptor subunit vcea | EEJ33_08880 | Not Available | - | 1903083 - 1904303 | 43445.5 |
| multidrug efflux mfs transporter outer membrane subunit vcec | EEJ33_08885 | Not Available | - | 1904284 - 1905738 | 52047.1 |
| tetr family multidrug efflux transcriptional regulator vcer | EEJ33_08890 | Not Available | + | 1905845 - 1906447 | 22609.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


