Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potc | EEJ33_08775 | Not Available | + | 1881937 - 1882707 | 28142.7 |
| extracellular solute-binding protein | EEJ33_08780 | Not Available | + | 1882810 - 1883841 | 38209.4 |
| extracellular solute-binding protein | EEJ33_08785 | Not Available | + | 1883954 - 1884991 | 39044.6 |
| chromosome partitioning protein para | EEJ33_08790 | Not Available | - | 1885141 - 1885875 | 28337.4 |
| hypothetical protein | EEJ33_08795 | Not Available | - | 1885892 - 1886050 | 5923.77 |
| sodium:alanine symporter family protein | EEJ33_08800 | Not Available | + | 1886553 - 1887929 | 48271.8 |
| lyse family translocator | EEJ33_08805 | Not Available | - | 1888002 - 1888640 | 22859.5 |
| duf2931 family protein | EEJ33_08810 | Not Available | - | 1888728 - 1889513 | 29894.6 |
| is3 family transposase | EEJ33_08820 | Not Available | + | 1889913 - 1890988 | 41696.2 |
| duf4123 domain-containing protein | EEJ33_08830 | Not Available | + | 1891392 - 1892210 | 31199.7 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


