Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | EEJ33_08720 | Not Available | + | 1873361 - 1873528 | 6373.55 |
| sulfite exporter taue/safe family protein | EEJ33_08725 | Not Available | + | 1873525 - 1874199 | 24422.9 |
| fumarate/nitrate reduction transcriptional regulator fnr | EEJ33_08730 | Not Available | + | 1874287 - 1875039 | 28073.0 |
| universal stress protein uspe | EEJ33_08740 | Not Available | + | 1875295 - 1876242 | 35320.5 |
| trna 2-thiocytidine(32) synthetase ttca | EEJ33_08745 | Not Available | + | 1876369 - 1877301 | 35138.5 |
| duf2987 domain-containing protein | EEJ33_08750 | Not Available | - | 1877378 - 1878037 | 24645.1 |
| glucosaminidase | EEJ33_08755 | Not Available | - | 1878039 - 1878842 | 30766.9 |
| hypothetical protein | EEJ33_08760 | Not Available | - | 1878832 - 1879677 | 30918.8 |
| spermidine/putrescine abc transporter atp-binding protein pota | EEJ33_08765 | Not Available | + | 1879963 - 1881096 | 42708.3 |
| spermidine/putrescine abc transporter permease potb | EEJ33_08770 | Not Available | + | 1881077 - 1881937 | 31898.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


