Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EEJ33_08615 | Not Available | - | 1838331 - 1838588 | 9690.66 |
| hypothetical protein | EEJ33_08620 | Not Available | - | 1838588 - 1839073 | 18343.3 |
| duf4123 domain-containing protein | EEJ33_08625 | Not Available | - | 1839086 - 1839835 | 28510.4 |
| hcp family type vi secretion system effector | EEJ33_08635 | Not Available | - | 1842066 - 1842584 | 19060.3 |
| hypothetical protein | EEJ33_08640 | Not Available | + | 1842666 - 1842935 | 10040.0 |
| martx multifunctional-autoprocessing repeats-in-toxin holotoxin rtxa | EEJ33_08645 | Not Available | - | 1843368 - 1856609 | 471474.0 |
| toxin-activating lysine-acyltransferase rtxc | EEJ33_08650 | Not Available | - | 1856633 - 1857094 | 17913.7 |
| peptide chain release factor 1 | EEJ33_08655 | Not Available | - | 1857120 - 1857479 | 13078.8 |
| peptidase domain-containing abc transporter | EEJ33_08660 | Not Available | + | 1857836 - 1859998 | 81267.3 |
| hlyd family type i secretion periplasmic adaptor subunit | EEJ33_08665 | Not Available | + | 1859953 - 1861356 | 52870.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


