Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-glutamate dehydrogenase | EEJ33_08515 | Not Available | + | 1816369 - 1821210 | 183587.0 |
| quinone-dependent dihydroorotate dehydrogenase | EEJ33_08520 | Not Available | + | 1821284 - 1822294 | 36711.6 |
| cell division protein zapc | EEJ33_08525 | Not Available | + | 1822449 - 1822991 | 20362.5 |
| hypothetical protein | EEJ33_08530 | Not Available | + | 1823294 - 1823479 | 7231.41 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | EEJ33_08535 | Not Available | + | 1823451 - 1825577 | 79804.6 |
| glutaredoxin family protein | EEJ33_08540 | Not Available | + | 1825586 - 1825828 | 9303.02 |
| abc transporter atp-binding protein | EEJ33_08545 | Not Available | + | 1825806 - 1827725 | 72124.1 |
| duf3466 family protein | EEJ33_08550 | Not Available | + | 1827731 - 1829482 | 62978.0 |
| ribosome modulation factor | EEJ33_08555 | Not Available | + | 1829649 - 1829822 | 6728.89 |
| beta-hydroxydecanoyl-acp dehydratase | EEJ33_08560 | Not Available | - | 1829906 - 1830424 | 19043.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


