Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation signal domain-containing protein | EEJ33_08415 | Not Available | + | 1790834 - 1793689 | 106590.0 |
| 4fe-4s dicluster domain-containing protein | EEJ33_08420 | Not Available | + | 1793701 - 1794309 | 21910.2 |
| formate dehydrogenase subunit gamma | EEJ33_08425 | Not Available | + | 1794310 - 1795383 | 40501.7 |
| hypothetical protein | EEJ33_08430 | Not Available | + | 1795370 - 1795792 | 15796.4 |
| nad-dependent protein deacylase | EEJ33_08435 | Not Available | + | 1795890 - 1796669 | 28948.6 |
| yajq family cyclic di-gmp-binding protein | EEJ33_08440 | Not Available | - | 1796802 - 1797284 | 18261.0 |
| 3-deoxy-7-phosphoheptulonate synthase | EEJ33_08445 | Not Available | - | 1797296 - 1798357 | 38935.5 |
| duf4442 domain-containing protein | EEJ33_08450 | Not Available | + | 1798633 - 1799109 | 17825.9 |
| hypothetical protein | EEJ33_08455 | Not Available | - | 1799102 - 1800451 | 52874.6 |
| s1 rna-binding domain-containing protein | EEJ33_08460 | Not Available | + | 1800553 - 1801386 | 30762.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


