Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EEJ33_08365 | Not Available | + | 1777048 - 1778502 | 54453.4 |
| hamp domain-containing protein | EEJ33_08370 | Not Available | + | 1778492 - 1780525 | 77465.1 |
| abc-f family atpase | EEJ33_08375 | Not Available | + | 1780846 - 1782438 | 59824.3 |
| hypothetical protein | EEJ33_08380 | Not Available | - | 1782829 - 1785471 | 99196.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EEJ33_08385 | Not Available | - | 1785839 - 1786684 | 31133.5 |
| duf3305 domain-containing protein | EEJ33_08390 | Not Available | + | 1786910 - 1787386 | 17960.2 |
| duf3306 domain-containing protein | EEJ33_08395 | Not Available | + | 1787313 - 1787978 | 24086.6 |
| 4fe-4s dicluster domain-containing protein | EEJ33_08400 | Not Available | + | 1788190 - 1789851 | 60025.4 |
| molecular chaperone | EEJ33_08405 | Not Available | + | 1789877 - 1790548 | 25012.4 |
| twin-arginine translocation signal domain-containing protein | EEJ33_08410 | Not Available | + | 1790625 - 1790822 | 7104.34 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


