Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd2 | EEJ33_08265 | Not Available | + | 1758001 - 1758405 | 14608.7 |
| energy transducer tonb | EEJ33_08270 | Not Available | + | 1758405 - 1759025 | 22911.8 |
| hypothetical protein | EEJ33_08275 | Not Available | + | 1759022 - 1760200 | 45151.4 |
| dna ligase | EEJ33_08280 | Not Available | + | 1760507 - 1761355 | 31921.2 |
| duf3080 domain-containing protein | EEJ33_08285 | Not Available | - | 1761362 - 1762345 | 37630.1 |
| sodium-coupled multidrug efflux mate transporter vcma | EEJ33_08290 | Not Available | - | 1762549 - 1763922 | 49369.2 |
| cpxcg motif-containing cysteine-rich protein | EEJ33_08295 | Not Available | - | 1764178 - 1764381 | 7615.9 |
| fructosamine kinase family protein | EEJ33_08300 | Not Available | - | 1764539 - 1765405 | 33830.9 |
| duf3802 family protein | EEJ33_08305 | Not Available | + | 1765935 - 1766276 | 12654.8 |
| peptidase p60 | EEJ33_08310 | Not Available | - | 1766287 - 1766787 | 18735.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


