Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | EEJ33_08215 | Not Available | + | 1748598 - 1749110 | 19319.3 |
| glycerophosphoryl diester phosphodiesterase | EEJ33_08220 | Not Available | - | 1749207 - 1749920 | 26980.3 |
| deor/glpr transcriptional regulator | EEJ33_08225 | Not Available | - | 1749948 - 1750709 | 27964.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | EEJ33_08230 | Not Available | - | 1750730 - 1751902 | 42992.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | EEJ33_08235 | Not Available | - | 1751892 - 1752734 | 31675.5 |
| abc transporter permease subunit | EEJ33_08240 | Not Available | - | 1752744 - 1753625 | 32594.7 |
| extracellular solute-binding protein | EEJ33_08245 | Not Available | - | 1753701 - 1755005 | 48291.8 |
| duf3450 domain-containing protein | EEJ33_08250 | Not Available | + | 1755324 - 1756082 | 28493.9 |
| mota/tolq/exbb proton channel family protein | EEJ33_08255 | Not Available | + | 1756082 - 1757455 | 49467.7 |
| mota/tolq/exbb proton channel family protein | EEJ33_08260 | Not Available | + | 1757462 - 1758004 | 20222.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


