Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EEJ33_08165 | Not Available | - | 1735638 - 1736915 | 46264.7 |
| abc transporter permease | EEJ33_08170 | Not Available | - | 1736919 - 1738133 | 44652.8 |
| tolc family protein | EEJ33_08175 | Not Available | - | 1738133 - 1739392 | 46656.6 |
| efflux rnd transporter periplasmic adaptor subunit | EEJ33_08180 | Not Available | - | 1739385 - 1740518 | 40547.4 |
| amino acid abc transporter substrate-binding protein | EEJ33_08185 | Not Available | - | 1740790 - 1741536 | 28309.0 |
| porin | EEJ33_08190 | Not Available | + | 1742085 - 1743056 | 35602.4 |
| catalase/peroxidase hpi | EEJ33_08195 | Not Available | - | 1743161 - 1745335 | 80598.9 |
| 6-phospho-beta-glucosidase | EEJ33_08200 | Not Available | + | 1745625 - 1747061 | 55096.4 |
| laci family dna-binding transcriptional regulator | EEJ33_08205 | Not Available | + | 1747097 - 1748131 | 37385.2 |
| rida family protein | EEJ33_08210 | Not Available | + | 1748267 - 1748629 | 13336.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


