Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid a modification system glycine carrier protein almf | EEJ33_08115 | Not Available | + | 1727625 - 1727861 | 8879.55 |
| glycine--lipid a transferase almg | EEJ33_08120 | Not Available | + | 1727863 - 1728684 | 31393.5 |
| asch domain-containing protein | EEJ33_08125 | Not Available | + | 1728839 - 1729156 | 12129.7 |
| duf2127 domain-containing protein | EEJ33_08130 | Not Available | + | 1729186 - 1729644 | 17065.1 |
| hypothetical protein | EEJ33_08135 | Not Available | + | 1729689 - 1730072 | 14468.1 |
| class ii fumarate hydratase | EEJ33_08140 | Not Available | - | 1730231 - 1731616 | 48971.6 |
| hypothetical protein | EEJ33_08145 | Not Available | - | 1731632 - 1732012 | 15285.4 |
| cytochrome ubiquinol oxidase subunit i | EEJ33_08150 | Not Available | + | 1732537 - 1733874 | 49137.8 |
| cytochrome d ubiquinol oxidase subunit ii | EEJ33_08155 | Not Available | + | 1733871 - 1734863 | 36444.4 |
| abc transporter atp-binding protein | EEJ33_08160 | Not Available | - | 1734937 - 1735638 | 25333.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


