Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | EEJ33_08060 | Not Available | + | 1716356 - 1717573 | 44004.7 |
| galactose-1-epimerase | EEJ33_08065 | Not Available | + | 1717603 - 1718634 | 38218.1 |
| ggdef domain-containing protein | EEJ33_08070 | Not Available | - | 1718652 - 1719941 | 49108.2 |
| eal domain-containing protein | EEJ33_08075 | Not Available | - | 1720025 - 1720879 | 32377.8 |
| sdr family oxidoreductase | EEJ33_08080 | Not Available | - | 1721120 - 1721878 | 26778.1 |
| acetolactate synthase alss | EEJ33_08085 | Not Available | - | 1721875 - 1723578 | 62019.8 |
| alpha-acetolactate decarboxylase | EEJ33_08090 | Not Available | - | 1723715 - 1724500 | 29341.9 |
| lysr family transcriptional regulator | EEJ33_08095 | Not Available | + | 1724609 - 1725487 | 32581.7 |
| superoxide dismutase | EEJ33_08105 | Not Available | + | 1725711 - 1725968 | 8953.54 |
| lipid a modification system glycine--protein ligase alme | EEJ33_08110 | Not Available | + | 1725971 - 1727641 | 63154.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


